Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm44471-201ENSMUST00000197963 100 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm5948-201ENSMUST00000219627 839 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm46379-201ENSMUST00000222551 265 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 AC140210.1-201ENSMUST00000224961 534 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim11Q99PQ2 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Mir669e-201ENSMUST00000117003 119 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm12401-201ENSMUST00000118435 228 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm13521-201ENSMUST00000118922 866 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm5255-201ENSMUST00000120125 642 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm13339-201ENSMUST00000120651 510 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm16184-201ENSMUST00000162324 573 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm17149-201ENSMUST00000164712 375 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm9890-201ENSMUST00000171867 537 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm2539-203ENSMUST00000181352 746 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Mir6922-201ENSMUST00000185099 66 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm4545-201ENSMUST00000190797 603 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm44356-201ENSMUST00000196731 111 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm43841-201ENSMUST00000199491 586 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm34583-203ENSMUST00000202586 454 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm4602-201ENSMUST00000203198 308 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm16475-202ENSMUST00000209033 528 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm45782-201ENSMUST00000212670 366 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm18892-201ENSMUST00000217628 881 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm7557-201ENSMUST00000221935 865 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Gm5374-201ENSMUST00000222868 657 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 CT009600.2-201ENSMUST00000226638 481 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Klf5-202ENSMUST00000226784 2852 ntBASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim11Q99PQ2 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim11Q99PQ2 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms