Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm23748-201ENSMUST00000104227 131 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm4911-201ENSMUST00000119388 945 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm27866-201ENSMUST00000184459 171 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm29141-201ENSMUST00000190357 882 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm5711-201ENSMUST00000197896 421 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 AC122327.2-201ENSMUST00000220883 120 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 AC122327.3-201ENSMUST00000221852 120 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 AC166341.1-201ENSMUST00000223360 105 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm10555-201ENSMUST00000193178 1791 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.04□□□□□ -1.12
Top1mtQ8R4U6 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Mir674-201ENSMUST00000102421 100 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm13141-201ENSMUST00000117417 456 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm14716-201ENSMUST00000120138 718 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm24545-201ENSMUST00000158651 85 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm20615-201ENSMUST00000177503 705 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Mir8105-201ENSMUST00000184718 89 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm36965-201ENSMUST00000193797 394 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm43089-201ENSMUST00000199162 275 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC073947.1-201ENSMUST00000216991 649 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC125019.1-201ENSMUST00000224809 908 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm24411-201ENSMUST00000083428 131 ntBASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Top1mtQ8R4U6 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Top1mtQ8R4U6 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.02□□□□□ -1.12
Top1mtQ8R4U6 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Top1mtQ8R4U6 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Top1mtQ8R4U6 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Top1mtQ8R4U6 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Top1mtQ8R4U6 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms