Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm23031-201ENSMUST00000157998 119 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm24680-201ENSMUST00000158759 126 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm43141-201ENSMUST00000199695 274 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm5723-201ENSMUST00000203096 432 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 AC125019.1-201ENSMUST00000224809 908 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.09□□□□□ -1.27
Prpf39Q8K2Z2 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm5319-201ENSMUST00000118965 873 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm14796-201ENSMUST00000121216 959 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm21392-201ENSMUST00000182950 972 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm29496-201ENSMUST00000189854 693 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm36932-201ENSMUST00000195226 929 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm23011-202ENSMUST00000197855 275 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Gm25587-201ENSMUST00000082498 166 ntBASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Prpf39Q8K2Z2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm14070-201ENSMUST00000120773 428 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm7599-201ENSMUST00000121453 796 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm6726-201ENSMUST00000172786 681 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm28739-201ENSMUST00000185415 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm28219-201ENSMUST00000185452 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm28542-201ENSMUST00000185545 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm28303-201ENSMUST00000185642 747 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm29244-201ENSMUST00000185825 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm29437-201ENSMUST00000185865 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm29412-201ENSMUST00000185869 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm28910-201ENSMUST00000185921 696 ntBASIC7.07□□□□□ -1.28
Prpf39Q8K2Z2 Gm28812-201ENSMUST00000185963 696 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms