Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm11880-201ENSMUST00000117612 399 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm6491-201ENSMUST00000118273 990 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm43590-201ENSMUST00000195987 387 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 AC122356.2-201ENSMUST00000226962 820 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Olfr683-201ENSMUST00000061284 960 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm5528-201ENSMUST00000076314 480 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.71□□□□□ -1.34
Ccdc28bQ8CEG5 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm14990-201ENSMUST00000122354 445 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm26197-201ENSMUST00000175033 115 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm29650-201ENSMUST00000188485 742 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm3511-201ENSMUST00000199823 204 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm44971-201ENSMUST00000206192 337 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm44705-201ENSMUST00000206719 339 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm22504-201ENSMUST00000082963 139 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc28bQ8CEG5 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ccdc28bQ8CEG5 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms