Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx6Q8C7R7 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx6Q8C7R7 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm25083-201ENSMUST00000102319 92 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm25498-201ENSMUST00000104424 129 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm11972-201ENSMUST00000118514 389 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm9439-201ENSMUST00000119554 973 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm12331-201ENSMUST00000119927 622 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm11581-201ENSMUST00000122024 763 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 BC064078-201ENSMUST00000122939 570 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm4308-201ENSMUST00000179735 914 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm44979-201ENSMUST00000206218 287 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm20274-201ENSMUST00000206967 584 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.87□□□□□ -1.31
Rfx6Q8C7R7 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm26416-201ENSMUST00000104280 134 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm8534-201ENSMUST00000118553 766 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm14466-201ENSMUST00000119028 451 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm15153-201ENSMUST00000119867 274 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm13237-201ENSMUST00000122151 635 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm17212-201ENSMUST00000166666 259 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm24923-201ENSMUST00000178201 88 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Mir6337-201ENSMUST00000184194 105 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm6472-202ENSMUST00000187973 582 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm28443-201ENSMUST00000189081 698 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm30517-201ENSMUST00000197350 772 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm43033-201ENSMUST00000199682 425 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm44147-201ENSMUST00000204658 94 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm2221-201ENSMUST00000209342 418 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm18781-201ENSMUST00000211252 924 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Gm24405-201ENSMUST00000083033 167 ntBASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Rfx6Q8C7R7 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms