Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Mir760-201ENSMUST00000103257 119 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm13983-201ENSMUST00000118018 865 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm12630-201ENSMUST00000121575 784 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Snora47-201ENSMUST00000157483 138 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Snora35-201ENSMUST00000104579 128 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm12842-201ENSMUST00000117298 476 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm4342-201ENSMUST00000118982 367 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm4956-202ENSMUST00000178869 672 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm42580-201ENSMUST00000197223 753 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm19116-201ENSMUST00000218592 642 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Col6a6Q8C6K9 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col6a6Q8C6K9 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.14□□□□□ -1.43
Col6a6Q8C6K9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms