Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm37310-201ENSMUST00000195237 2968 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm14864-201ENSMUST00000116164 1087 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm15164-201ENSMUST00000122203 271 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm20454-201ENSMUST00000172713 221 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm43089-201ENSMUST00000199162 275 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm45626-201ENSMUST00000210093 361 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm18620-201ENSMUST00000222295 324 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 CT009728.1-201ENSMUST00000225228 1050 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Zfp865-202ENSMUST00000076791 1129 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.99□□□□□ -1.45
Nkx3-1P97436 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 AC135119.1-202ENSMUST00000228435 2203 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm26144-201ENSMUST00000104475 132 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm14202-201ENSMUST00000120121 311 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm4992-201ENSMUST00000120256 768 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm11581-201ENSMUST00000122024 763 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm14747-201ENSMUST00000149888 984 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm37322-201ENSMUST00000193409 337 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm19324-201ENSMUST00000213229 1169 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Gm8607-201ENSMUST00000221864 431 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.98□□□□□ -1.45
Nkx3-1P97436 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nkx3-1P97436 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms