Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Gm43377-201ENSMUST00000201640 455 ntBASIC6.63□□□□□ -1.35
Sox3P53784 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.63□□□□□ -1.35
Sox3P53784 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.63□□□□□ -1.35
Sox3P53784 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.63□□□□□ -1.35
Sox3P53784 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.63□□□□□ -1.35
Sox3P53784 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox3P53784 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox3P53784 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.63□□□□□ -1.35
Sox3P53784 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Sox3P53784 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox3P53784 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox3P53784 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.62□□□□□ -1.35
Sox3P53784 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Sox3P53784 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Gm15422-201ENSMUST00000117453 541 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm11462-201ENSMUST00000117749 562 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm14375-201ENSMUST00000119490 855 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Sox3P53784 Gm8061-201ENSMUST00000122380 350 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.62□□□□□ -1.35
Sox3P53784 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.62□□□□□ -1.35
Sox3P53784 Gm27653-201ENSMUST00000185037 136 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm38068-201ENSMUST00000192546 540 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm23011-202ENSMUST00000197855 275 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gm43212-201ENSMUST00000198208 394 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.62□□□□□ -1.35
Sox3P53784 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.62□□□□□ -1.35
Sox3P53784 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Sox3P53784 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Sox3P53784 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Sox3P53784 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.61□□□□□ -1.35
Sox3P53784 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Sox3P53784 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Sox3P53784 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms