Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.78□□□□□ -1.32
Lire1P11260 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm23701-201ENSMUST00000103893 110 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm25757-201ENSMUST00000103986 123 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm22847-201ENSMUST00000157707 105 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm17973-201ENSMUST00000174509 520 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm27458-201ENSMUST00000185108 121 ntBASIC6.78□□□□□ -1.32
Lire1P11260 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm8524-201ENSMUST00000186232 379 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm18699-201ENSMUST00000190713 243 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm43542-201ENSMUST00000199505 379 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm9419-201ENSMUST00000200672 567 ntBASIC6.78□□□□□ -1.32
Lire1P11260 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm6667-201ENSMUST00000217169 564 ntBASIC6.78□□□□□ -1.32
Lire1P11260 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.78□□□□□ -1.32
Lire1P11260 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.78□□□□□ -1.32
Lire1P11260 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.78□□□□□ -1.32
Lire1P11260 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lire1P11260 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Lire1P11260 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Lire1P11260 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lire1P11260 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm4822-201ENSMUST00000077551 479 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm20900-201ENSMUST00000078729 472 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lire1P11260 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lire1P11260 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.78□□□□□ -1.32
Lire1P11260 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lire1P11260 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.78□□□□□ -1.32
Lire1P11260 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lire1P11260 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.78□□□□□ -1.32
Lire1P11260 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.77□□□□□ -1.32
Lire1P11260 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.77□□□□□ -1.32
Lire1P11260 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Lire1P11260 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Lire1P11260 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
Lire1P11260 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lire1P11260 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Gm25396-201ENSMUST00000103981 133 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm13771-201ENSMUST00000117988 238 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm15616-201ENSMUST00000118662 375 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm14631-201ENSMUST00000119067 594 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm15763-201ENSMUST00000120136 403 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm14876-201ENSMUST00000120795 327 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.77□□□□□ -1.33
Lire1P11260 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm24782-201ENSMUST00000157641 132 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms