Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm14580-201ENSMUST00000119122 718 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Gm12262-201ENSMUST00000119915 305 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm18199-201ENSMUST00000173820 835 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Gm18191-201ENSMUST00000174624 824 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm37463-201ENSMUST00000193819 796 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Gm9517-201ENSMUST00000195021 874 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Gm43850-201ENSMUST00000202021 578 ntBASIC8.2□□□□□ -1.1
Col4a1P02463 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Col4a1P02463 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm26289-201ENSMUST00000104169 131 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm23674-201ENSMUST00000157473 131 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm22552-201ENSMUST00000157796 337 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm24343-201ENSMUST00000158708 111 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm25363-201ENSMUST00000158850 245 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm23343-201ENSMUST00000158964 143 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Mir6971-201ENSMUST00000183497 63 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm37187-201ENSMUST00000193425 341 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm44111-201ENSMUST00000204649 399 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.19□□□□□ -1.1
Col4a1P02463 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.19□□□□□ -1.1
Col4a1P02463 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Col4a1P02463 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col4a1P02463 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm14870-201ENSMUST00000118414 156 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm14294-201ENSMUST00000119749 751 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm14300-201ENSMUST00000120800 946 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm23884-201ENSMUST00000122687 294 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm26023-201ENSMUST00000122722 313 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm25387-201ENSMUST00000157813 132 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm22210-201ENSMUST00000158101 144 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm7952-201ENSMUST00000180540 984 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm8241-201ENSMUST00000189286 816 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm34768-201ENSMUST00000193884 565 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm8869-201ENSMUST00000195222 947 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm44361-201ENSMUST00000197960 94 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col4a1P02463 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm7731-201ENSMUST00000091759 470 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col4a1P02463 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm9005-201ENSMUST00000119908 607 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm9428-201ENSMUST00000127214 769 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm24395-201ENSMUST00000158139 125 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm23071-201ENSMUST00000158242 115 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms