Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm24860-201ENSMUST00000158457 276 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm38015-201ENSMUST00000193048 188 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 AC093043.2-201ENSMUST00000228616 2017 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm22103-201ENSMUST00000116733 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm26475-201ENSMUST00000116769 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm23620-201ENSMUST00000116812 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm25042-201ENSMUST00000116856 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm25540-201ENSMUST00000116880 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm11561-201ENSMUST00000117429 417 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm15149-201ENSMUST00000119370 360 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm23550-201ENSMUST00000179003 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm25123-201ENSMUST00000179154 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm25353-201ENSMUST00000179366 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm22992-201ENSMUST00000179496 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm25892-201ENSMUST00000179867 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm24092-201ENSMUST00000180257 121 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm8869-201ENSMUST00000195222 947 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gm42580-201ENSMUST00000197223 753 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Col6a3E9PWQ3 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm38339-201ENSMUST00000195479 1829 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm28188-201ENSMUST00000190483 236 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm43743-202ENSMUST00000198353 491 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm25415-201ENSMUST00000104220 132 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm12190-201ENSMUST00000120001 187 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Gm20368-201ENSMUST00000220716 301 ntBASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col6a3E9PWQ3 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms