Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm46231-201ENSMUST00000220152 314 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm9315-201ENSMUST00000222696 908 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 AC160114.2-201ENSMUST00000223021 300 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm13930-201ENSMUST00000118569 368 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm5319-201ENSMUST00000118965 873 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm16248-201ENSMUST00000124238 243 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm22728-201ENSMUST00000158087 129 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm17212-201ENSMUST00000166666 259 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm26528-201ENSMUST00000181965 283 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Mir6921-201ENSMUST00000183719 80 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm43656-201ENSMUST00000197882 434 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm10126-201ENSMUST00000221732 168 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Nup88Q8CEC0 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Snora21-201ENSMUST00000082967 137 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.04□□□□□ -1.12
Nup88Q8CEC0 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms