Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm22836-201ENSMUST00000158441 61 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm6921-201ENSMUST00000161478 435 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm6100-201ENSMUST00000180253 403 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm4374-201ENSMUST00000204929 424 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC9.91□□□□□ -0.82
Clcn1Q64347 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 AC154487.1-201ENSMUST00000224649 226 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 AC167013.3-201ENSMUST00000228110 989 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 AC154649.2-201ENSMUST00000228189 808 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Clcn1Q64347 C78859-201ENSMUST00000212800 5943 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm43681-201ENSMUST00000201581 1903 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm6982-201ENSMUST00000118752 1560 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm25313-201ENSMUST00000101817 116 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm14509-201ENSMUST00000117312 1286 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm7571-201ENSMUST00000120252 927 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm6568-201ENSMUST00000122274 697 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm14457-201ENSMUST00000148069 1161 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm23852-201ENSMUST00000158376 77 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm17198-201ENSMUST00000171792 1154 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm17973-201ENSMUST00000174509 520 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm23287-201ENSMUST00000179427 116 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm23143-201ENSMUST00000180137 116 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm21054-201ENSMUST00000203981 380 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC9.9□□□□□ -0.82
Clcn1Q64347 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm9973-202ENSMUST00000220926 166 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Diaph3-204ENSMUST00000226254 682 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 AC166822.1-201ENSMUST00000227667 636 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm6776-201ENSMUST00000057752 900 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm24871-201ENSMUST00000083099 116 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm25099-201ENSMUST00000093716 116 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Rnu5g-201ENSMUST00000093721 116 ntBASIC9.9□□□□□ -0.82
Clcn1Q64347 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.9□□□□□ -0.82
Clcn1Q64347 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clcn1Q64347 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Clcn1Q64347 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Clcn1Q64347 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC9.9□□□□□ -0.83
Clcn1Q64347 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Clcn1Q64347 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clcn1Q64347 Gm42636-201ENSMUST00000197174 2239 ntBASIC9.9□□□□□ -0.83
Clcn1Q64347 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clcn1Q64347 Gm43528-201ENSMUST00000199492 1674 ntBASIC9.9□□□□□ -0.83
Clcn1Q64347 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
Clcn1Q64347 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Clcn1Q64347 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Clcn1Q64347 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC9.9□□□□□ -0.83
Clcn1Q64347 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clcn1Q64347 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Clcn1Q64347 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Clcn1Q64347 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clcn1Q64347 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Clcn1Q64347 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Clcn1Q64347 Gm43845-201ENSMUST00000202462 1820 ntBASIC9.89□□□□□ -0.83
Clcn1Q64347 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms