Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cux1P53564 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Cux1P53564 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cux1P53564 Gm24173-201ENSMUST00000104130 128 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Gm22371-201ENSMUST00000104588 130 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC10.42□□□□□ -0.74
Cux1P53564 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Gm6181-201ENSMUST00000117187 264 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Gm15149-201ENSMUST00000119370 360 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC10.42□□□□□ -0.74
Cux1P53564 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cux1P53564 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Gm18752-201ENSMUST00000192876 608 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Gm33178-201ENSMUST00000212090 257 ntBASIC10.42□□□□□ -0.74
Cux1P53564 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 AC170086.2-201ENSMUST00000224733 803 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cux1P53564 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cux1P53564 Gm37022-201ENSMUST00000192517 2254 ntBASIC10.42□□□□□ -0.74
Cux1P53564 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cux1P53564 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cux1P53564 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cux1P53564 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Cux1P53564 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cux1P53564 Gm10555-201ENSMUST00000193178 1791 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Cux1P53564 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cux1P53564 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC10.41□□□□□ -0.74
Cux1P53564 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cux1P53564 Gm14580-201ENSMUST00000119122 718 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.41□□□□□ -0.74
Cux1P53564 Mir6971-201ENSMUST00000183497 63 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Mir6973b-201ENSMUST00000184185 80 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Gm27507-201ENSMUST00000184199 93 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Mir7653-201ENSMUST00000184358 61 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Gm7266-201ENSMUST00000187999 405 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC10.41□□□□□ -0.74
Cux1P53564 Gm37493-201ENSMUST00000193167 433 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Gm43850-201ENSMUST00000202021 578 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC10.41□□□□□ -0.74
Cux1P53564 AC158521.1-202ENSMUST00000224352 645 ntBASIC10.41□□□□□ -0.74
Cux1P53564 AC159205.4-201ENSMUST00000225964 704 ntBASIC10.41□□□□□ -0.74
Cux1P53564 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cux1P53564 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cux1P53564 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cux1P53564 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Cux1P53564 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cux1P53564 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Gm8276-201ENSMUST00000192231 1812 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC10.4□□□□□ -0.74
Cux1P53564 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Cux1P53564 Gm14038-201ENSMUST00000121500 807 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Gm23259-201ENSMUST00000158318 303 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Gm24179-201ENSMUST00000158925 127 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Gm17366-201ENSMUST00000167629 187 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Gm3841-201ENSMUST00000191399 451 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC10.4□□□□□ -0.74
Cux1P53564 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC10.4□□□□□ -0.74
Cux1P53564 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC10.4□□□□□ -0.74
Cux1P53564 AC139197.1-201ENSMUST00000228332 813 ntBASIC10.4□□□□□ -0.74
Cux1P53564 AC120375.2-202ENSMUST00000228722 397 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cux1P53564 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cux1P53564 Gm37783-201ENSMUST00000192025 1856 ntBASIC10.4□□□□□ -0.74
Cux1P53564 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Cux1P53564 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC10.4□□□□□ -0.75
Cux1P53564 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Cux1P53564 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC10.4□□□□□ -0.75
Cux1P53564 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cux1P53564 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Gm9005-201ENSMUST00000119908 607 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Gm15967-201ENSMUST00000120027 1116 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC10.39□□□□□ -0.75
Cux1P53564 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC10.39□□□□□ -0.75
Cux1P53564 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Gm25246-201ENSMUST00000175476 69 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Gm43235-201ENSMUST00000200121 297 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Gm18805-201ENSMUST00000206872 655 ntBASIC10.39□□□□□ -0.75
Cux1P53564 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Gm22126-201ENSMUST00000083244 142 ntBASIC10.39□□□□□ -0.75
Cux1P53564 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Cux1P53564 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cux1P53564 Gm6786-201ENSMUST00000203165 1915 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms