Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col18a1P39061 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col18a1P39061 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC9.01□□□□□ -0.97
Col18a1P39061 Gm37784-201ENSMUST00000193233 189 ntBASIC9.01□□□□□ -0.97
Col18a1P39061 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Col18a1P39061 Gm44768-201ENSMUST00000205719 393 ntBASIC9.01□□□□□ -0.97
Col18a1P39061 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC9.01□□□□□ -0.97
Col18a1P39061 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col18a1P39061 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.01□□□□□ -0.97
Col18a1P39061 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Col18a1P39061 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Col18a1P39061 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Col18a1P39061 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Col18a1P39061 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Col18a1P39061 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Col18a1P39061 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC9□□□□□ -0.97
Col18a1P39061 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC9□□□□□ -0.97
Col18a1P39061 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC9□□□□□ -0.97
Col18a1P39061 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Col18a1P39061 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Gm37897-201ENSMUST00000192613 3561 ntBASIC9□□□□□ -0.97
Col18a1P39061 Gm37783-201ENSMUST00000192025 1856 ntBASIC9□□□□□ -0.97
Col18a1P39061 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Gm14521-201ENSMUST00000119545 350 ntBASIC9□□□□□ -0.97
Col18a1P39061 Gm12372-201ENSMUST00000121654 768 ntBASIC9□□□□□ -0.97
Col18a1P39061 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC9□□□□□ -0.97
Col18a1P39061 Gm23632-201ENSMUST00000175289 125 ntBASIC9□□□□□ -0.97
Col18a1P39061 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC9□□□□□ -0.97
Col18a1P39061 Gm18348-201ENSMUST00000191227 820 ntBASIC9□□□□□ -0.97
Col18a1P39061 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Gm37265-201ENSMUST00000191698 885 ntBASIC9□□□□□ -0.97
Col18a1P39061 Ighv5-3-201ENSMUST00000195336 322 ntBASIC9□□□□□ -0.97
Col18a1P39061 Gm35013-201ENSMUST00000197218 832 ntBASIC9□□□□□ -0.97
Col18a1P39061 Gm18290-201ENSMUST00000202900 844 ntBASIC9□□□□□ -0.97
Col18a1P39061 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC9□□□□□ -0.97
Col18a1P39061 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Gm45850-201ENSMUST00000212536 338 ntBASIC9□□□□□ -0.97
Col18a1P39061 AC135353.1-201ENSMUST00000215330 630 ntBASIC9□□□□□ -0.97
Col18a1P39061 AC170086.2-201ENSMUST00000224733 803 ntBASIC9□□□□□ -0.97
Col18a1P39061 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col18a1P39061 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9□□□□□ -0.97
Col18a1P39061 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Col18a1P39061 CT025619.3-201ENSMUST00000216299 3267 ntBASIC9□□□□□ -0.97
Col18a1P39061 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col18a1P39061 AC112142.1-203ENSMUST00000228670 2472 ntBASIC9□□□□□ -0.97
Col18a1P39061 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Col18a1P39061 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Col18a1P39061 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Mir466f-2-201ENSMUST00000104805 94 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Gm12400-201ENSMUST00000120915 1003 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC8.99□□□□□ -0.97
Col18a1P39061 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm2058-201ENSMUST00000178791 560 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Mir3473e-201ENSMUST00000183932 110 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC8.99□□□□□ -0.97
Col18a1P39061 AC153899.1-201ENSMUST00000214092 1117 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Gm36262-201ENSMUST00000223274 499 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm26130-201ENSMUST00000083171 138 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col18a1P39061 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Col18a1P39061 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col18a1P39061 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC8.99□□□□□ -0.97
Col18a1P39061 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Col18a1P39061 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col18a1P39061 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm37962-201ENSMUST00000195535 2034 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC8.99□□□□□ -0.97
Col18a1P39061 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.99□□□□□ -0.97
Col18a1P39061 Gm37358-201ENSMUST00000195492 479 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Gm42437-201ENSMUST00000197263 923 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Gm45874-201ENSMUST00000212423 346 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 AC132104.1-201ENSMUST00000213615 260 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 AC154583.1-201ENSMUST00000224788 655 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.99□□□□□ -0.97
Col18a1P39061 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms