Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm13921-201ENSMUST00000119411 463 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm11517-201ENSMUST00000119491 387 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm11955-201ENSMUST00000119801 470 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm15158-201ENSMUST00000120577 570 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm13586-201ENSMUST00000121784 464 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm12152-201ENSMUST00000122465 684 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC5.64□□□□□ -1.51
Cdx1P18111 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC5.64□□□□□ -1.51
Cdx1P18111 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm8164-201ENSMUST00000169120 1192 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm6489-201ENSMUST00000178167 696 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm21430-201ENSMUST00000182998 998 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm36932-201ENSMUST00000195226 929 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm43840-201ENSMUST00000199444 484 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm31663-202ENSMUST00000208481 1190 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm4800-201ENSMUST00000215776 1266 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 AC099629.1-201ENSMUST00000226778 464 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm25926-201ENSMUST00000082899 160 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Gm26063-201ENSMUST00000083378 107 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Cdx1P18111 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdx1P18111 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Cdx1P18111 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdx1P18111 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm11462-201ENSMUST00000117749 562 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Gm13690-201ENSMUST00000118989 285 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Gm13463-201ENSMUST00000119020 233 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Gm15187-201ENSMUST00000122329 264 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm22035-201ENSMUST00000157284 228 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm27435-201ENSMUST00000183588 88 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm19254-201ENSMUST00000204828 294 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 CT009738.1-201ENSMUST00000219031 809 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 AC116502.1-201ENSMUST00000220989 291 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Gm46317-201ENSMUST00000221103 393 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC5.63□□□□□ -1.51
Cdx1P18111 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 AC139323.1-201ENSMUST00000223370 1040 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 CT010472.1-201ENSMUST00000224000 704 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 AC154487.1-201ENSMUST00000224649 226 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Cdx1P18111 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdx1P18111 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Cdx1P18111 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.63□□□□□ -1.51
Cdx1P18111 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Cdx1P18111 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
Cdx1P18111 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms