Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col4a1P02463 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col4a1P02463 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col4a1P02463 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm15158-201ENSMUST00000120577 570 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Mir7653-201ENSMUST00000184358 61 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Gm37689-201ENSMUST00000193139 275 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
Col4a1P02463 AC154718.1-201ENSMUST00000226676 250 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 AC125117.2-201ENSMUST00000228344 1140 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 AC120375.2-202ENSMUST00000228722 397 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.21□□□□□ -1.09
Col4a1P02463 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Col4a1P02463 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col4a1P02463 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm23739-201ENSMUST00000102295 108 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm6119-201ENSMUST00000193443 1206 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Gm37072-201ENSMUST00000194570 837 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 Gm18592-201ENSMUST00000221529 276 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.21□□□□□ -1.1
Col4a1P02463 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.21□□□□□ -1.1
Col4a1P02463 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col4a1P02463 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col4a1P02463 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col4a1P02463 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col4a1P02463 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col4a1P02463 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms