Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm45446-201ENSMUST00000209348 216 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 AC126554.4-201ENSMUST00000221055 409 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Vaultrc5-201ENSMUST00000083211 143 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Mir484-201ENSMUST00000093566 67 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm43845-201ENSMUST00000202462 1820 ntBASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim8Q99PJ2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Trim8Q99PJ2 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm12073-201ENSMUST00000117382 524 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm13006-201ENSMUST00000118683 214 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm15049-201ENSMUST00000120474 463 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm25178-201ENSMUST00000122633 325 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm23740-201ENSMUST00000157385 100 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm4781-201ENSMUST00000167995 781 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm19840-201ENSMUST00000169624 882 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm23633-201ENSMUST00000175293 119 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm27427-201ENSMUST00000185134 193 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm37322-201ENSMUST00000193409 337 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm44356-201ENSMUST00000196731 111 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm42965-201ENSMUST00000201254 250 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm19253-201ENSMUST00000204279 307 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm5307-201ENSMUST00000204772 760 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm18562-201ENSMUST00000209949 915 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AV026068-219ENSMUST00000224148 933 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AV026068-224ENSMUST00000224827 928 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm5316-201ENSMUST00000050391 270 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm6054-201ENSMUST00000078052 378 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Mir135b-201ENSMUST00000083501 97 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.02□□□□□ -1.29
Trim8Q99PJ2 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim8Q99PJ2 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms