Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Mir760-201ENSMUST00000103257 119 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm11821-201ENSMUST00000117335 979 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm14893-201ENSMUST00000117904 282 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm12242-201ENSMUST00000118824 738 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm5319-201ENSMUST00000118965 873 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm23674-201ENSMUST00000157473 131 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm27018-201ENSMUST00000181136 225 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm9167-201ENSMUST00000182469 962 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm37809-201ENSMUST00000195050 931 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm44075-201ENSMUST00000204208 216 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm32983-201ENSMUST00000208500 505 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.87□□□□□ -1.15
Syne4Q8CII8 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Syne4Q8CII8 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm12135-201ENSMUST00000119170 466 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm12518-201ENSMUST00000122075 779 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm25675-201ENSMUST00000174979 118 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm26607-201ENSMUST00000180661 867 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm28186-201ENSMUST00000187447 679 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm28443-201ENSMUST00000189081 698 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm8241-201ENSMUST00000189286 816 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm19035-202ENSMUST00000194575 959 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm45782-201ENSMUST00000212670 366 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm46203-201ENSMUST00000218130 478 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Olfr687-201ENSMUST00000098154 938 ntBASIC7.86□□□□□ -1.15
Syne4Q8CII8 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Syne4Q8CII8 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms