Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ccdc28aQ8CEI3 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm22774-201ENSMUST00000102084 109 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm11865-201ENSMUST00000118093 859 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm11833-201ENSMUST00000118393 853 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm14466-201ENSMUST00000119028 451 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15538-201ENSMUST00000121410 313 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm3585-201ENSMUST00000173438 875 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm18501-201ENSMUST00000185363 664 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm6123-201ENSMUST00000193658 1069 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm45454-201ENSMUST00000211484 455 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm7368-201ENSMUST00000213307 367 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm5341-201ENSMUST00000058881 489 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Robo2-210ENSMUST00000226478 8059 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Ccdc28aQ8CEI3 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm26079-201ENSMUST00000104066 133 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm24986-201ENSMUST00000104452 132 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm13798-201ENSMUST00000118285 139 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm25969-201ENSMUST00000157166 132 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm23079-201ENSMUST00000157847 117 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm7481-201ENSMUST00000182020 995 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15500-201ENSMUST00000071523 894 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Snora9-201ENSMUST00000082579 133 ntBASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc28aQ8CEI3 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.05□□□□□ -1.28
Ccdc28aQ8CEI3 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms