Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a6Q8C6K9 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm5406-201ENSMUST00000120054 766 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm28581-201ENSMUST00000186086 2177 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm37072-201ENSMUST00000194570 837 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm5055-201ENSMUST00000215697 581 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm11198-201ENSMUST00000119771 974 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm15763-201ENSMUST00000120136 403 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm7212-201ENSMUST00000120817 348 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Mir1960-201ENSMUST00000157488 78 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm7952-201ENSMUST00000180540 984 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm27348-201ENSMUST00000184511 170 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm43141-201ENSMUST00000199695 274 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm43725-201ENSMUST00000200122 369 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a6Q8C6K9 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm4992-201ENSMUST00000120256 768 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm22655-201ENSMUST00000174949 96 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm25675-201ENSMUST00000174979 118 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm18469-201ENSMUST00000208850 439 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm19195-201ENSMUST00000222018 511 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms