Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm5787-201ENSMUST00000183049 1038 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Mir6769b-201ENSMUST00000184793 60 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm8077-201ENSMUST00000209221 1024 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm2767-201ENSMUST00000209582 473 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm18960-201ENSMUST00000222962 713 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 AC134869.2-201ENSMUST00000225788 421 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm5250-201ENSMUST00000059065 321 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Clcn1Q64347 AC153152.1-201ENSMUST00000221105 2742 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Clcn1Q64347 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 AC138284.3-201ENSMUST00000217345 4663 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm28497-201ENSMUST00000189646 3029 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm15054-201ENSMUST00000117393 281 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm12851-201ENSMUST00000117920 421 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm11922-201ENSMUST00000118967 475 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm15153-201ENSMUST00000119867 274 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm15362-201ENSMUST00000121459 388 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 n-R5s30-201ENSMUST00000122624 122 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm22186-201ENSMUST00000157822 122 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm22206-201ENSMUST00000158612 116 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm44147-201ENSMUST00000204658 94 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm44931-201ENSMUST00000206056 545 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC9.92□□□□□ -0.82
Clcn1Q64347 AC122290.1-201ENSMUST00000225631 1078 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 AC129935.1-201ENSMUST00000226302 873 ntBASIC9.92□□□□□ -0.82
Clcn1Q64347 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC9.92□□□□□ -0.82
Clcn1Q64347 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Clcn1Q64347 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Clcn1Q64347 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clcn1Q64347 Mir503-201ENSMUST00000102168 71 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm12067-201ENSMUST00000119755 1148 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm11653-201ENSMUST00000119992 1009 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm12632-201ENSMUST00000121223 495 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm24840-201ENSMUST00000122603 147 ntBASIC9.91□□□□□ -0.82
Clcn1Q64347 Gm24893-201ENSMUST00000122745 369 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms