Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm25546-201ENSMUST00000103977 132 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm13915-201ENSMUST00000119314 931 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm13038-201ENSMUST00000119886 459 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm11343-201ENSMUST00000120579 599 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm12692-201ENSMUST00000121092 546 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm12642-201ENSMUST00000121098 876 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm23276-201ENSMUST00000157913 138 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm24735-201ENSMUST00000158859 118 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm9274-201ENSMUST00000182505 984 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm29496-201ENSMUST00000189854 693 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm9057-201ENSMUST00000198791 296 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm19092-201ENSMUST00000209036 969 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx1P18111 AC139209.2-201ENSMUST00000227680 1208 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cdx1P18111 Gm5436-201ENSMUST00000058103 643 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cdx1P18111 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 Gm10705-201ENSMUST00000098980 461 ntBASIC5.65□□□□□ -1.5
Cdx1P18111 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.65□□□□□ -1.51
Cdx1P18111 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdx1P18111 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx1P18111 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx1P18111 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx1P18111 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdx1P18111 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Cdx1P18111 AC154747.4-203ENSMUST00000225893 1384 ntBASIC5.65□□□□□ -1.51
Cdx1P18111 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Cdx1P18111 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx1P18111 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx1P18111 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.65□□□□□ -1.51
Cdx1P18111 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Cdx1P18111 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.65□□□□□ -1.51
Cdx1P18111 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdx1P18111 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm44249-201ENSMUST00000204538 1805 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Cdx1P18111 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.64□□□□□ -1.51
Cdx1P18111 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Cdx1P18111 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx1P18111 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms