Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.03□□□□□ -1.12
Col1a1P11087 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col1a1P11087 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col1a1P11087 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.03□□□□□ -1.12
Col1a1P11087 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col1a1P11087 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.02□□□□□ -1.12
Col1a1P11087 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col1a1P11087 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Col1a1P11087 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm18716-201ENSMUST00000204507 1603 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col1a1P11087 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC8.02□□□□□ -1.13
Col1a1P11087 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm12630-201ENSMUST00000121575 784 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Gm14613-201ENSMUST00000122239 752 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC8.02□□□□□ -1.13
Col1a1P11087 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm17366-201ENSMUST00000167629 187 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 AV026068-216ENSMUST00000223874 328 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 AV026068-218ENSMUST00000223980 575 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col1a1P11087 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col1a1P11087 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm8526-201ENSMUST00000079153 475 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Col1a1P11087 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Col1a1P11087 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col1a1P11087 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col1a1P11087 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.02□□□□□ -1.13
Col1a1P11087 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Col1a1P11087 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm4073-201ENSMUST00000176792 3500 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.01□□□□□ -1.13
Col1a1P11087 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm27460-201ENSMUST00000184213 100 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.01□□□□□ -1.13
Col1a1P11087 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 AC159205.4-201ENSMUST00000225964 704 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 AC166574.7-201ENSMUST00000228502 704 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm5612-201ENSMUST00000053326 375 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm24695-201ENSMUST00000083877 83 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col1a1P11087 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.01□□□□□ -1.13
Col1a1P11087 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.01□□□□□ -1.13
Col1a1P11087 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.01□□□□□ -1.13
Col1a1P11087 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col1a1P11087 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Col1a1P11087 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col1a1P11087 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Gm15194-201ENSMUST00000120453 434 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm6446-201ENSMUST00000120604 818 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm14054-201ENSMUST00000120744 704 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm9428-201ENSMUST00000127214 769 ntBASIC8□□□□□ -1.13
Col1a1P11087 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col1a1P11087 Gm25374-201ENSMUST00000158158 101 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm27854-201ENSMUST00000175578 244 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm27030-201ENSMUST00000182551 464 ntBASIC8□□□□□ -1.13
Col1a1P11087 Gm6693-201ENSMUST00000189583 813 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms