Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25717-201ENSMUST00000158631 353 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm25489-201ENSMUST00000158727 141 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm9064-201ENSMUST00000163579 566 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm22932-201ENSMUST00000175510 72 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Mir133b-201ENSMUST00000083546 119 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm22499-201ENSMUST00000104501 135 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm23149-201ENSMUST00000158837 230 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Mir6907-201ENSMUST00000183764 71 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm45660-201ENSMUST00000210267 151 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm15732-201ENSMUST00000079794 480 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm8812-201ENSMUST00000118496 412 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm23884-201ENSMUST00000122687 294 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm44265-201ENSMUST00000203631 465 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm25187-201ENSMUST00000083906 133 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm37022-201ENSMUST00000192517 2254 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm26376-201ENSMUST00000104784 110 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm3650-201ENSMUST00000180600 747 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms