Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Upk3aQ9JKX8 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm12242-201ENSMUST00000118824 738 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm25395-201ENSMUST00000157343 272 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm23031-201ENSMUST00000157998 119 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm25556-201ENSMUST00000158077 144 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm23810-201ENSMUST00000175150 74 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm20690-201ENSMUST00000177341 315 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm6681-201ENSMUST00000205215 607 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm4585-201ENSMUST00000207218 452 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm4042-201ENSMUST00000216946 637 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm19007-201ENSMUST00000217746 874 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Upk3aQ9JKX8 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.59□□□□□ -1.36
Upk3aQ9JKX8 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Upk3aQ9JKX8 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Upk3aQ9JKX8 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm22256-201ENSMUST00000102291 107 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm13732-201ENSMUST00000117753 535 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm6726-201ENSMUST00000172786 681 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Mir7033-201ENSMUST00000184259 81 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Mir6987-201ENSMUST00000184789 73 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm28195-201ENSMUST00000186992 372 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm29240-201ENSMUST00000187248 286 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm43089-201ENSMUST00000199162 275 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.58□□□□□ -1.36
Upk3aQ9JKX8 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms