Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm42713-201ENSMUST00000202709 945 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm45136-201ENSMUST00000205793 943 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm18907-201ENSMUST00000209719 932 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm34424-201ENSMUST00000213400 782 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.1□□□□□ -1.11
Nup88Q8CEC0 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm12804-201ENSMUST00000121030 999 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm26323-201ENSMUST00000157743 175 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm27360-201ENSMUST00000183487 80 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm27156-201ENSMUST00000184589 754 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm28117-201ENSMUST00000188472 371 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm24826-202ENSMUST00000197298 216 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm30517-201ENSMUST00000197350 772 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 AC123533.2-201ENSMUST00000228176 375 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Nup88Q8CEC0 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.09□□□□□ -1.12
Nup88Q8CEC0 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Nup88Q8CEC0 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm14869-201ENSMUST00000119007 884 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm8550-201ENSMUST00000161621 653 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm29156-201ENSMUST00000187764 499 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm35638-201ENSMUST00000220724 652 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms