Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm6362-201ENSMUST00000217686 836 ntBASIC9.95□□□□□ -0.82
Clcn1Q64347 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clcn1Q64347 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.95□□□□□ -0.82
Clcn1Q64347 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC9.95□□□□□ -0.82
Clcn1Q64347 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC9.95□□□□□ -0.82
Clcn1Q64347 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clcn1Q64347 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Clcn1Q64347 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Gm37761-201ENSMUST00000194989 2098 ntBASIC9.95□□□□□ -0.82
Clcn1Q64347 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Clcn1Q64347 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Clcn1Q64347 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Clcn1Q64347 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC9.95□□□□□ -0.82
Clcn1Q64347 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm24869-201ENSMUST00000104072 128 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm11865-201ENSMUST00000118093 859 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm11926-201ENSMUST00000118520 430 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm14631-201ENSMUST00000119067 594 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm11798-201ENSMUST00000119150 421 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC9.94□□□□□ -0.82
Clcn1Q64347 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm17138-201ENSMUST00000165702 459 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm27595-201ENSMUST00000184579 112 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Ighv1-21-201ENSMUST00000194856 351 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 CT030124.1-201ENSMUST00000217130 235 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 AC139376.1-201ENSMUST00000220056 1250 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm19134-201ENSMUST00000221203 487 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 AC154851.2-201ENSMUST00000222172 644 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 CT030166.1-201ENSMUST00000222654 357 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 CT030238.4-201ENSMUST00000228579 801 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Mir135b-201ENSMUST00000083501 97 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Clcn1Q64347 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Clcn1Q64347 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.94□□□□□ -0.82
Clcn1Q64347 AC156802.2-201ENSMUST00000225239 5740 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm44093-201ENSMUST00000204381 1802 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Serpina3h-202ENSMUST00000116393 1226 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm15766-201ENSMUST00000118025 813 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm25052-201ENSMUST00000122661 158 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm6838-201ENSMUST00000172851 582 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm23639-201ENSMUST00000175078 132 ntBASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Clcn1Q64347 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms