Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.28□□□□□ -1.4
AtmQ62388 Gm17988-201ENSMUST00000208796 535 ntBASIC6.28□□□□□ -1.4
AtmQ62388 Gm45608-201ENSMUST00000210948 389 ntBASIC6.28□□□□□ -1.4
AtmQ62388 LOC665443-201ENSMUST00000212284 796 ntBASIC6.28□□□□□ -1.4
AtmQ62388 Gm19189-201ENSMUST00000221689 754 ntBASIC6.28□□□□□ -1.4
AtmQ62388 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AtmQ62388 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.28□□□□□ -1.4
AtmQ62388 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
AtmQ62388 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AtmQ62388 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
AtmQ62388 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
AtmQ62388 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AtmQ62388 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AtmQ62388 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AtmQ62388 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
AtmQ62388 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
AtmQ62388 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
AtmQ62388 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.27□□□□□ -1.4
AtmQ62388 Gm44090-201ENSMUST00000204669 1834 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Gm26312-201ENSMUST00000157769 165 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm9064-201ENSMUST00000163579 566 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm6472-201ENSMUST00000178147 651 ntBASIC6.27□□□□□ -1.41
AtmQ62388 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.27□□□□□ -1.41
AtmQ62388 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.27□□□□□ -1.41
AtmQ62388 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.27□□□□□ -1.41
AtmQ62388 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
AtmQ62388 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Robo2-201ENSMUST00000116586 4764 ntTSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Gm27853-201ENSMUST00000184176 250 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm37196-201ENSMUST00000194762 906 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
AtmQ62388 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.27□□□□□ -1.41
AtmQ62388 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
AtmQ62388 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC6.27□□□□□ -1.41
AtmQ62388 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
AtmQ62388 Gm2199-201ENSMUST00000119065 874 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm22275-201ENSMUST00000122470 310 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm25550-201ENSMUST00000158079 128 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm27219-201ENSMUST00000184633 742 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Gm27286-201ENSMUST00000184934 179 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 Gm7768-201ENSMUST00000222988 597 ntBASIC6.27□□□□□ -1.41
AtmQ62388 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.27□□□□□ -1.41
AtmQ62388 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AtmQ62388 AC156025.3-201ENSMUST00000225919 3095 ntBASIC6.26□□□□□ -1.41
AtmQ62388 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
AtmQ62388 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.26□□□□□ -1.41
AtmQ62388 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
AtmQ62388 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
AtmQ62388 Gm13007-201ENSMUST00000121866 365 ntBASIC6.26□□□□□ -1.41
AtmQ62388 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms