Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.43□□□□□ -1.22
Shmt1P50431 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 AC154527.3-201ENSMUST00000225519 989 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm24919-201ENSMUST00000083020 106 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Shmt1P50431 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Shmt1P50431 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.43□□□□□ -1.22
Shmt1P50431 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Shmt1P50431 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Shmt1P50431 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Shmt1P50431 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Shmt1P50431 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm25311-201ENSMUST00000104136 132 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm12754-201ENSMUST00000121908 454 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm2619-202ENSMUST00000166777 651 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm4207-201ENSMUST00000173144 960 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm42580-201ENSMUST00000197223 753 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Trdv3-201ENSMUST00000198551 309 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm20223-201ENSMUST00000199932 805 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm43849-201ENSMUST00000201086 215 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm24451-201ENSMUST00000083353 133 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm42968-201ENSMUST00000198578 1372 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Shmt1P50431 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Shmt1P50431 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.42□□□□□ -1.22
Shmt1P50431 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Shmt1P50431 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Shmt1P50431 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Shmt1P50431 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.41□□□□□ -1.22
Shmt1P50431 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Shmt1P50431 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.41□□□□□ -1.22
Shmt1P50431 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.41□□□□□ -1.22
Shmt1P50431 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Shmt1P50431 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Shmt1P50431 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Shmt1P50431 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Shmt1P50431 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Shmt1P50431 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 BC064078-201ENSMUST00000122939 570 ntBASIC7.41□□□□□ -1.22
Shmt1P50431 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.41□□□□□ -1.22
Shmt1P50431 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 Gm23740-201ENSMUST00000157385 100 ntBASIC7.41□□□□□ -1.22
Shmt1P50431 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC7.41□□□□□ -1.22
Shmt1P50431 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Shmt1P50431 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms