Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Tnfsf4P43488 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.53□□□□□ -1.36
Tnfsf4P43488 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Tnfsf4P43488 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Mir678-201ENSMUST00000102114 84 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm23437-201ENSMUST00000104036 127 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm13222-201ENSMUST00000119638 138 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm8577-201ENSMUST00000122420 986 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Mir6337-201ENSMUST00000184194 105 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm27507-201ENSMUST00000184199 93 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm5305-201ENSMUST00000204010 746 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm44590-201ENSMUST00000206161 391 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm6887-201ENSMUST00000080945 482 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.52□□□□□ -1.37
Tnfsf4P43488 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Tnfsf4P43488 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Tnfsf4P43488 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm11318-201ENSMUST00000118640 961 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm12601-201ENSMUST00000118994 846 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm5135-201ENSMUST00000121100 573 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm25969-201ENSMUST00000157166 132 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm26183-201ENSMUST00000157685 139 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm7420-201ENSMUST00000162836 842 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm7502-201ENSMUST00000169235 733 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm6726-201ENSMUST00000172786 681 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm25574-201ENSMUST00000175245 249 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm24756-201ENSMUST00000177002 96 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm38373-201ENSMUST00000192042 288 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm43147-201ENSMUST00000196944 542 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm42573-201ENSMUST00000202327 478 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm25852-201ENSMUST00000082790 130 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Gm23734-201ENSMUST00000083753 109 ntBASIC6.51□□□□□ -1.37
Tnfsf4P43488 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms