Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Col2a1P28481 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Col2a1P28481 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC7.77□□□□□ -1.17
Col2a1P28481 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm39041-201ENSMUST00000205557 3902 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Col2a1P28481 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Col2a1P28481 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm22953-201ENSMUST00000116724 101 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gm13930-201ENSMUST00000118569 368 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Col2a1P28481 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm9274-201ENSMUST00000182505 984 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm8183-201ENSMUST00000183134 980 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gm7554-201ENSMUST00000202282 574 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gm44538-201ENSMUST00000205615 348 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.76□□□□□ -1.17
Col2a1P28481 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.76□□□□□ -1.17
Col2a1P28481 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.76□□□□□ -1.17
Col2a1P28481 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.76□□□□□ -1.17
Col2a1P28481 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Col2a1P28481 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC7.76□□□□□ -1.17
Col2a1P28481 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm14870-201ENSMUST00000118414 156 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm25550-201ENSMUST00000158079 128 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm18006-201ENSMUST00000177411 662 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm37380-201ENSMUST00000193752 397 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm8667-201ENSMUST00000211112 449 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm19340-201ENSMUST00000221995 345 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col2a1P28481 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col2a1P28481 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col2a1P28481 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Col2a1P28481 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Col2a1P28481 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col2a1P28481 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm24709-201ENSMUST00000104123 132 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm11504-201ENSMUST00000120211 173 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm14038-201ENSMUST00000121500 807 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms