Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.1□□□□□ -1.43
P20040 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.1□□□□□ -1.43
P20040 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
P20040 Gm26130-201ENSMUST00000083171 138 ntBASIC6.1□□□□□ -1.43
P20040 Gm24411-201ENSMUST00000083428 131 ntBASIC6.1□□□□□ -1.43
P20040 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
P20040 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
P20040 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.1□□□□□ -1.43
P20040 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
P20040 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.1□□□□□ -1.43
P20040 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
P20040 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.1□□□□□ -1.43
P20040 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
P20040 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.1□□□□□ -1.43
P20040 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
P20040 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.1□□□□□ -1.43
P20040 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.09□□□□□ -1.43
P20040 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
P20040 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
P20040 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
P20040 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Gm25593-201ENSMUST00000102272 96 ntBASIC6.09□□□□□ -1.43
P20040 Gm23437-201ENSMUST00000104036 127 ntBASIC6.09□□□□□ -1.43
P20040 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
P20040 Gm15739-201ENSMUST00000118049 872 ntBASIC6.09□□□□□ -1.43
P20040 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.09□□□□□ -1.43
P20040 Gm15081-201ENSMUST00000119794 844 ntBASIC6.09□□□□□ -1.43
P20040 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.09□□□□□ -1.43
P20040 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.09□□□□□ -1.43
P20040 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.09□□□□□ -1.43
P20040 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
P20040 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Mir7084-201ENSMUST00000183876 70 ntBASIC6.09□□□□□ -1.43
P20040 Gm27866-201ENSMUST00000184459 171 ntBASIC6.09□□□□□ -1.43
P20040 Gm28117-201ENSMUST00000188472 371 ntBASIC6.09□□□□□ -1.43
P20040 Gm38373-201ENSMUST00000192042 288 ntBASIC6.09□□□□□ -1.43
P20040 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.09□□□□□ -1.43
P20040 Gm38337-201ENSMUST00000193986 599 ntBASIC6.09□□□□□ -1.43
P20040 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Gm9419-201ENSMUST00000200672 567 ntBASIC6.09□□□□□ -1.43
P20040 Gm45042-201ENSMUST00000207377 211 ntBASIC6.09□□□□□ -1.43
P20040 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.09□□□□□ -1.43
P20040 Gm45100-201ENSMUST00000209153 391 ntBASIC6.09□□□□□ -1.43
P20040 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.09□□□□□ -1.43
P20040 Gm17611-202ENSMUST00000220613 814 ntBASIC6.09□□□□□ -1.43
P20040 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.09□□□□□ -1.43
P20040 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
P20040 Gm15500-201ENSMUST00000071523 894 ntBASIC6.09□□□□□ -1.43
P20040 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
P20040 Gm6166-201ENSMUST00000098689 409 ntBASIC6.09□□□□□ -1.43
P20040 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
P20040 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
P20040 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.09□□□□□ -1.43
P20040 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.09□□□□□ -1.43
P20040 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
P20040 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
P20040 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.09□□□□□ -1.44
P20040 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.09□□□□□ -1.44
P20040 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
P20040 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
P20040 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
P20040 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
P20040 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
P20040 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
P20040 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.08□□□□□ -1.44
P20040 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.08□□□□□ -1.44
P20040 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
P20040 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
P20040 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
P20040 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
P20040 Gm12635-201ENSMUST00000117285 752 ntBASIC6.08□□□□□ -1.44
P20040 Gm15538-201ENSMUST00000121410 313 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms