Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm27866-201ENSMUST00000184459 171 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm27972-201ENSMUST00000184720 137 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm28580-201ENSMUST00000186767 88 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm5334-201ENSMUST00000187472 720 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm38022-201ENSMUST00000191762 403 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm38373-201ENSMUST00000192042 288 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm44112-201ENSMUST00000204787 372 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 AV026068-219ENSMUST00000224148 933 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim3Q9R1R2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm14904-201ENSMUST00000117067 335 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm15203-201ENSMUST00000117668 455 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm13006-201ENSMUST00000118683 214 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm11198-201ENSMUST00000119771 974 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm12477-201ENSMUST00000121221 571 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm26480-201ENSMUST00000122619 297 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm25505-201ENSMUST00000157220 246 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm28070-201ENSMUST00000191502 445 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm36932-201ENSMUST00000195226 929 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm9419-201ENSMUST00000200672 567 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm44971-201ENSMUST00000206192 337 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm44722-201ENSMUST00000206473 436 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm6166-201ENSMUST00000098689 409 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.53□□□□□ -1.36
Trim3Q9R1R2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim3Q9R1R2 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Trim3Q9R1R2 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.52□□□□□ -1.36
Trim3Q9R1R2 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim3Q9R1R2 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.52□□□□□ -1.37
Trim3Q9R1R2 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms