Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 AC125487.2-201ENSMUST00000219810 1300 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm24473-201ENSMUST00000104483 131 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm14729-201ENSMUST00000118373 689 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Mir1929-201ENSMUST00000158635 93 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm42673-201ENSMUST00000202676 337 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm9604-201ENSMUST00000211175 433 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc47Q9D024 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.09□□□□□ -1.12
Ccdc47Q9D024 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm45290-201ENSMUST00000211177 3890 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm13744-201ENSMUST00000118953 850 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm24442-201ENSMUST00000157238 327 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm23027-201ENSMUST00000158771 158 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm5080-201ENSMUST00000220341 743 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc47Q9D024 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Gm25724-201ENSMUST00000104531 117 ntBASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc47Q9D024 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms