Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rtn4Q99P72 Extl2-201ENSMUST00000029575 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rtn4Q99P72 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rtn4Q99P72 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rtn4Q99P72 Catspere1-201ENSMUST00000194528 2949 ntBASIC11.32□□□□□ -0.6
Rtn4Q99P72 Dusp18-202ENSMUST00000109996 2685 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rtn4Q99P72 Kpna7-201ENSMUST00000110672 2262 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rtn4Q99P72 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Nckap5-202ENSMUST00000094609 2965 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Olfr412-202ENSMUST00000216362 1786 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tcf7l2-212ENSMUST00000111659 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Zfp949-203ENSMUST00000161458 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 AC154828.1-201ENSMUST00000220696 2810 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm24935-201ENSMUST00000103770 110 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tfam-202ENSMUST00000105432 779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Vegfa-203ENSMUST00000113519 513 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm15113-201ENSMUST00000119280 836 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm8832-201ENSMUST00000119890 395 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm12880-201ENSMUST00000120652 494 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm12499-201ENSMUST00000121961 546 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Myl1-207ENSMUST00000186202 874 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm29464-201ENSMUST00000187692 513 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm44426-201ENSMUST00000204258 355 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm39132-201ENSMUST00000210446 429 ntTSL 3 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Ddo-205ENSMUST00000214102 792 ntTSL 3 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm18903-201ENSMUST00000215343 480 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm5917-201ENSMUST00000217638 721 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 AC154755.1-201ENSMUST00000225244 537 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 AC152394.1-201ENSMUST00000227360 1086 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Ezh2-202ENSMUST00000092648 2115 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Optn-201ENSMUST00000027986 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Depdc5-201ENSMUST00000049780 3569 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Mcf2l-204ENSMUST00000110867 3864 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm39041-201ENSMUST00000205557 3902 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Foxn3-202ENSMUST00000085108 2611 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm3286-201ENSMUST00000171752 1316 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Gm18954-201ENSMUST00000222200 1792 ntBASIC11.31□□□□□ -0.6
Rtn4Q99P72 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rtn4Q99P72 Tgfb1i1-204ENSMUST00000164710 3788 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm43504-201ENSMUST00000196056 2038 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm11198-201ENSMUST00000119771 974 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm14394-201ENSMUST00000120307 295 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm12464-201ENSMUST00000121385 1016 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm12163-201ENSMUST00000121597 389 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm1947-201ENSMUST00000122451 910 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm22014-201ENSMUST00000158785 290 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm24418-201ENSMUST00000177597 79 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm24639-201ENSMUST00000178518 79 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm23076-201ENSMUST00000179082 79 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm25077-201ENSMUST00000179157 79 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Gm23283-201ENSMUST00000179362 110 ntBASIC11.3□□□□□ -0.6
Rtn4Q99P72 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms