Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scrt1Q99M85 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.15□□□□□ -1.42
Scrt1Q99M85 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.15□□□□□ -1.43
Scrt1Q99M85 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Scrt1Q99M85 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm13732-201ENSMUST00000117753 535 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm12844-201ENSMUST00000119463 582 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm13754-201ENSMUST00000120486 998 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm5166-201ENSMUST00000121332 573 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm12778-201ENSMUST00000122341 333 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm16284-201ENSMUST00000140995 400 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm25505-201ENSMUST00000157220 246 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm9274-201ENSMUST00000182505 984 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm7867-201ENSMUST00000189856 546 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm37439-201ENSMUST00000193150 856 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm8058-201ENSMUST00000217247 587 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm18620-201ENSMUST00000222295 324 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Malat1-201ENSMUST00000172812 6983 ntBASIC6.14□□□□□ -1.43
Scrt1Q99M85 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scrt1Q99M85 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm22774-201ENSMUST00000102084 109 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm4853-201ENSMUST00000119359 394 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm23386-201ENSMUST00000158585 144 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Mir3078-201ENSMUST00000175231 87 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms