Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sf3b6P59708 Gm24696-201ENSMUST00000083878 134 ntBASIC6.78□□□□□ -1.32
Sf3b6P59708 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sf3b6P59708 Gm5446-201ENSMUST00000091762 784 ntBASIC6.78□□□□□ -1.32
Sf3b6P59708 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sf3b6P59708 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.78□□□□□ -1.32
Sf3b6P59708 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.78□□□□□ -1.32
Sf3b6P59708 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sf3b6P59708 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sf3b6P59708 Gm37210-201ENSMUST00000192484 2004 ntBASIC6.77□□□□□ -1.32
Sf3b6P59708 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Sf3b6P59708 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.77□□□□□ -1.32
Sf3b6P59708 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Sf3b6P59708 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Sf3b6P59708 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm6913-201ENSMUST00000100019 348 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm12838-201ENSMUST00000116278 325 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm12687-201ENSMUST00000119752 706 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm11834-201ENSMUST00000122257 585 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm14710-201ENSMUST00000146082 1066 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm7162-201ENSMUST00000161205 1024 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm18397-201ENSMUST00000176704 587 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm8993-201ENSMUST00000182182 983 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm18342-201ENSMUST00000186987 694 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm2427-201ENSMUST00000189121 881 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm36638-201ENSMUST00000193295 400 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm44451-201ENSMUST00000203767 483 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm18338-201ENSMUST00000222381 560 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm5590-201ENSMUST00000059110 345 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sf3b6P59708 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.77□□□□□ -1.33
Sf3b6P59708 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sf3b6P59708 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.77□□□□□ -1.33
Sf3b6P59708 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sf3b6P59708 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.76□□□□□ -1.33
Sf3b6P59708 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sf3b6P59708 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.76□□□□□ -1.33
Sf3b6P59708 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms