Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HttP42859 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.01□□□□□ -1.29
HttP42859 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm16074-201ENSMUST00000119524 444 ntBASIC7.01□□□□□ -1.29
HttP42859 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HttP42859 Gm27820-201ENSMUST00000183628 175 ntBASIC7.01□□□□□ -1.29
HttP42859 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Gm7838-201ENSMUST00000203221 1189 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm46192-201ENSMUST00000217894 326 ntBASIC7.01□□□□□ -1.29
HttP42859 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.01□□□□□ -1.29
HttP42859 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
HttP42859 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.01□□□□□ -1.29
HttP42859 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HttP42859 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm45746-201ENSMUST00000212623 2447 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm24855-201ENSMUST00000104848 97 ntBASIC7.01□□□□□ -1.29
HttP42859 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC7.01□□□□□ -1.29
HttP42859 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC7.01□□□□□ -1.29
HttP42859 Gm18800-202ENSMUST00000188688 1105 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm43745-201ENSMUST00000198085 1883 ntBASIC7.01□□□□□ -1.29
HttP42859 Gm9321-201ENSMUST00000221179 778 ntBASIC7.01□□□□□ -1.29
HttP42859 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HttP42859 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HttP42859 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HttP42859 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HttP42859 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Zmym3-203ENSMUST00000117901 5178 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC7□□□□□ -1.29
HttP42859 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Gm28377-201ENSMUST00000189695 720 ntBASIC7□□□□□ -1.29
HttP42859 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Gm19060-201ENSMUST00000201959 421 ntBASIC7□□□□□ -1.29
HttP42859 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC7□□□□□ -1.29
HttP42859 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HttP42859 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Dpysl2-201ENSMUST00000022629 4520 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7□□□□□ -1.29
HttP42859 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Gm43343-201ENSMUST00000202454 1926 ntBASIC7□□□□□ -1.29
HttP42859 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC7□□□□□ -1.29
HttP42859 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7□□□□□ -1.29
HttP42859 Gm3605-201ENSMUST00000185858 440 ntBASIC7□□□□□ -1.29
HttP42859 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7□□□□□ -1.29
HttP42859 Gm18422-201ENSMUST00000203663 1032 ntBASIC7□□□□□ -1.29
HttP42859 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC7□□□□□ -1.29
HttP42859 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC7□□□□□ -1.29
HttP42859 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
HttP42859 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HttP42859 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7□□□□□ -1.29
HttP42859 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HttP42859 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.99□□□□□ -1.29
HttP42859 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
HttP42859 Gm8692-201ENSMUST00000118102 438 ntBASIC6.99□□□□□ -1.29
HttP42859 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.99□□□□□ -1.29
HttP42859 Gm37235-201ENSMUST00000195171 59 ntBASIC6.99□□□□□ -1.29
HttP42859 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.99□□□□□ -1.29
HttP42859 Gm44683-201ENSMUST00000209088 484 ntBASIC6.99□□□□□ -1.29
HttP42859 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.99□□□□□ -1.29
HttP42859 Gm18996-201ENSMUST00000214851 755 ntBASIC6.99□□□□□ -1.29
HttP42859 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms