Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm5512-202ENSMUST00000220222 1522 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC9.07□□□□□ -0.96
Col18a1P39061 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm13013-201ENSMUST00000119087 523 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm23884-201ENSMUST00000122687 294 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm23662-201ENSMUST00000158046 111 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm4332-201ENSMUST00000196114 346 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 AC134439.1-201ENSMUST00000220923 600 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 CT025538.2-201ENSMUST00000226083 772 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm42636-201ENSMUST00000197174 2239 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 AC138284.1-201ENSMUST00000214258 3236 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Col18a1P39061 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 AC139754.2-201ENSMUST00000218037 1455 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col18a1P39061 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm14202-201ENSMUST00000120121 311 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 Mir6903-201ENSMUST00000183597 88 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm38280-201ENSMUST00000192610 158 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm37845-201ENSMUST00000194977 355 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm42652-201ENSMUST00000199073 614 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm34149-201ENSMUST00000203547 304 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm45750-201ENSMUST00000211966 354 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Gm45782-201ENSMUST00000212670 366 ntBASIC9.07□□□□□ -0.96
Col18a1P39061 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col18a1P39061 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC9.07□□□□□ -0.96
Col18a1P39061 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col18a1P39061 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col18a1P39061 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC9.06□□□□□ -0.96
Col18a1P39061 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
Col18a1P39061 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC9.06□□□□□ -0.96
Col18a1P39061 Gm42736-201ENSMUST00000200723 1353 ntBASIC9.06□□□□□ -0.96
Col18a1P39061 Gm24173-201ENSMUST00000104130 128 ntBASIC9.06□□□□□ -0.96
Col18a1P39061 Gm14038-201ENSMUST00000121500 807 ntBASIC9.06□□□□□ -0.96
Col18a1P39061 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC9.06□□□□□ -0.96
Col18a1P39061 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Col18a1P39061 Gm28934-201ENSMUST00000186491 346 ntBASIC9.06□□□□□ -0.96
Col18a1P39061 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC9.06□□□□□ -0.96
Col18a1P39061 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Mir134-201ENSMUST00000083492 71 ntBASIC9.06□□□□□ -0.96
Col18a1P39061 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
Col18a1P39061 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col18a1P39061 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
Col18a1P39061 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.06□□□□□ -0.96
Col18a1P39061 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm44437-201ENSMUST00000203832 4038 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 Gm15073-201ENSMUST00000117432 634 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm22724-201ENSMUST00000158091 127 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC9.05□□□□□ -0.96
Col18a1P39061 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC9.05□□□□□ -0.96
Col18a1P39061 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Gm44548-201ENSMUST00000208929 192 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC9.05□□□□□ -0.96
Col18a1P39061 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC9.05□□□□□ -0.96
Col18a1P39061 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 AC122459.2-201ENSMUST00000227099 638 ntBASIC9.05□□□□□ -0.96
Col18a1P39061 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Col18a1P39061 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms