Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm22820-201ENSMUST00000157205 329 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm26729-201ENSMUST00000180744 352 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Mir6403-201ENSMUST00000185007 129 ntBASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col6a3E9PWQ3 Gm12442-201ENSMUST00000118372 338 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm8524-201ENSMUST00000186232 379 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm17981-201ENSMUST00000191109 739 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Mir1963-201ENSMUST00000158594 59 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Mir3104-201ENSMUST00000174911 63 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm37784-201ENSMUST00000193233 189 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm17775-201ENSMUST00000198542 258 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm18100-201ENSMUST00000200897 452 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm10688-201ENSMUST00000214985 520 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm37326-201ENSMUST00000192828 3071 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm3189-201ENSMUST00000205595 832 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Clec2j-201ENSMUST00000032517 515 ntBASIC6.59□□□□□ -1.35
Col6a3E9PWQ3 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Col6a3E9PWQ3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col6a3E9PWQ3 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Col6a3E9PWQ3 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col6a3E9PWQ3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm8317-201ENSMUST00000121261 471 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm5830-201ENSMUST00000049117 443 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms