Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm4585-201ENSMUST00000207218 452 ntBASIC7.81□□□□□ -1.16
Smc1aQ9CU62 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Olfr683-201ENSMUST00000061284 960 ntBASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Mir7b-201ENSMUST00000083557 111 ntBASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.81□□□□□ -1.16
Smc1aQ9CU62 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Smc1aQ9CU62 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm22671-201ENSMUST00000104420 134 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm12174-201ENSMUST00000119853 813 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm12804-201ENSMUST00000121030 999 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm24157-201ENSMUST00000175265 111 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Mir6403-201ENSMUST00000185007 129 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm7412-201ENSMUST00000191692 605 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm38177-201ENSMUST00000192213 1040 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm43849-201ENSMUST00000201086 215 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm6581-201ENSMUST00000214545 260 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Smc1aQ9CU62 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm12321-201ENSMUST00000121485 804 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Mir7084-201ENSMUST00000183876 70 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm43212-201ENSMUST00000198208 394 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm42734-201ENSMUST00000201656 878 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.79□□□□□ -1.16
Smc1aQ9CU62 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.79□□□□□ -1.16
Smc1aQ9CU62 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms