Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm19088-201ENSMUST00000198800 566 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm3511-201ENSMUST00000199823 204 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm42573-201ENSMUST00000202327 478 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm5418-201ENSMUST00000206932 528 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf3Q99LI7 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf3Q99LI7 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm23834-201ENSMUST00000104436 129 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm25843-201ENSMUST00000122582 314 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm24228-201ENSMUST00000158829 129 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm4373-201ENSMUST00000178571 556 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm37669-201ENSMUST00000192184 820 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm9710-201ENSMUST00000198053 499 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm17611-202ENSMUST00000220613 814 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm19011-201ENSMUST00000221777 808 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gm5374-202ENSMUST00000222910 314 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
Cstf3Q99LI7 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.7□□□□□ -1.34
Cstf3Q99LI7 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Mir503-201ENSMUST00000102168 71 ntBASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Gm14279-201ENSMUST00000117142 332 ntBASIC6.7□□□□□ -1.34
Cstf3Q99LI7 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms