Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clrn1Q8K445 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm22470-201ENSMUST00000104117 130 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm23834-201ENSMUST00000104436 129 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm7129-201ENSMUST00000117402 997 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm14787-201ENSMUST00000121236 388 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm27218-201ENSMUST00000183745 392 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm27866-201ENSMUST00000184459 171 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm43235-201ENSMUST00000200121 297 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 AC121542.1-201ENSMUST00000227245 721 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clrn1Q8K445 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.81□□□□□ -1.32
Clrn1Q8K445 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm24340-201ENSMUST00000104208 97 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm13423-201ENSMUST00000117205 888 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm8312-201ENSMUST00000119380 618 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm10913-201ENSMUST00000133732 463 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm23082-201ENSMUST00000157852 133 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm3121-201ENSMUST00000187086 406 ntBASIC6.8□□□□□ -1.32
Clrn1Q8K445 Gm28573-201ENSMUST00000187821 380 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms