Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lrif1Q8CDD9 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lrif1Q8CDD9 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lrif1Q8CDD9 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lrif1Q8CDD9 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.81□□□□□ -1.32
Lrif1Q8CDD9 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm13878-201ENSMUST00000117986 577 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm15778-201ENSMUST00000118469 608 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm11850-201ENSMUST00000119679 479 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm29496-201ENSMUST00000189854 693 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm29759-201ENSMUST00000205860 327 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm45198-201ENSMUST00000206796 591 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm18860-201ENSMUST00000212029 764 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm46231-201ENSMUST00000220152 314 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm9315-201ENSMUST00000222696 908 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.8□□□□□ -1.32
Lrif1Q8CDD9 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm12331-201ENSMUST00000119927 622 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm15362-201ENSMUST00000121459 388 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm24139-201ENSMUST00000122780 288 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm26323-201ENSMUST00000157743 175 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm23891-201ENSMUST00000158114 138 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm6061-201ENSMUST00000175860 492 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm27373-201ENSMUST00000184017 184 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm2505-201ENSMUST00000200413 825 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.79□□□□□ -1.32
Lrif1Q8CDD9 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lrif1Q8CDD9 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms