Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.16□□□□□ -1.1
Traf1P39428 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Traf1P39428 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.15□□□□□ -1.1
Traf1P39428 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Traf1P39428 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.1
Traf1P39428 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Mir697-201ENSMUST00000102316 109 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Traf1P39428 Gm25760-201ENSMUST00000103989 132 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm15081-201ENSMUST00000119794 844 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm13754-201ENSMUST00000120486 998 ntBASIC8.15□□□□□ -1.1
Traf1P39428 BC064078-201ENSMUST00000122939 570 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC8.15□□□□□ -1.1
Traf1P39428 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Gm19480-201ENSMUST00000185547 667 ntBASIC8.15□□□□□ -1.1
Traf1P39428 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.15□□□□□ -1.1
Traf1P39428 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Gm28801-201ENSMUST00000188761 449 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Gm18430-201ENSMUST00000197534 682 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm3549-201ENSMUST00000203873 794 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.15□□□□□ -1.1
Traf1P39428 Gm17822-201ENSMUST00000204307 351 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm9357-201ENSMUST00000207138 805 ntBASIC8.15□□□□□ -1.1
Traf1P39428 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.15□□□□□ -1.1
Traf1P39428 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Traf1P39428 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Traf1P39428 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Traf1P39428 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.15□□□□□ -1.11
Traf1P39428 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Traf1P39428 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.15□□□□□ -1.11
Traf1P39428 Gm43229-201ENSMUST00000201812 1850 ntBASIC8.15□□□□□ -1.11
Traf1P39428 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.15□□□□□ -1.11
Traf1P39428 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Traf1P39428 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Traf1P39428 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Traf1P39428 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Traf1P39428 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Traf1P39428 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Traf1P39428 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Traf1P39428 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
Traf1P39428 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Traf1P39428 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
Traf1P39428 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Mir1929-201ENSMUST00000158635 93 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Gm6264-201ENSMUST00000160802 624 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.14□□□□□ -1.11
Traf1P39428 Gm4956-202ENSMUST00000178869 672 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Traf1P39428 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Gm37526-201ENSMUST00000194640 619 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC8.14□□□□□ -1.11
Traf1P39428 Gm21054-201ENSMUST00000203981 380 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Gm44279-201ENSMUST00000205154 472 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Gm2975-201ENSMUST00000209710 820 ntBASIC8.14□□□□□ -1.11
Traf1P39428 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.14□□□□□ -1.11
Traf1P39428 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Traf1P39428 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Traf1P39428 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Traf1P39428 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Traf1P39428 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Traf1P39428 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.14□□□□□ -1.11
Traf1P39428 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Gm8878-201ENSMUST00000173552 1725 ntBASIC8.14□□□□□ -1.11
Traf1P39428 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Traf1P39428 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms