Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm7499-201ENSMUST00000210423 813 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 CT009556.1-201ENSMUST00000227282 449 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Col4a1P02463 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col4a1P02463 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm11533-201ENSMUST00000120287 477 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Col4a1P02463 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm37784-201ENSMUST00000193233 189 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm17824-201ENSMUST00000197690 805 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm18839-201ENSMUST00000204292 670 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm19212-201ENSMUST00000216642 862 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC8.3□□□□□ -1.08
Col4a1P02463 AC166574.3-201ENSMUST00000226725 367 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col4a1P02463 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.3□□□□□ -1.08
Col4a1P02463 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm7986-201ENSMUST00000221336 551 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col4a1P02463 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm10221-201ENSMUST00000088299 309 ntBASIC8.3□□□□□ -1.08
Col4a1P02463 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Col4a1P02463 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col4a1P02463 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.29□□□□□ -1.08
Col4a1P02463 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col4a1P02463 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col4a1P02463 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col4a1P02463 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
Col4a1P02463 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Col4a1P02463 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col4a1P02463 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Col4a1P02463 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col4a1P02463 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Col4a1P02463 Gm24473-201ENSMUST00000104483 131 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm14712-201ENSMUST00000120195 772 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm8648-201ENSMUST00000122457 221 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm24179-201ENSMUST00000158925 127 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm27030-201ENSMUST00000182551 464 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm28455-201ENSMUST00000189105 1290 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm18838-201ENSMUST00000204855 886 ntBASIC8.29□□□□□ -1.08
Col4a1P02463 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.29□□□□□ -1.08
Col4a1P02463 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms