Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm4825-201ENSMUST00000079690 408 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC5.56□□□□□ -1.52
Hmgb3O54879 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hmgb3O54879 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.56□□□□□ -1.52
Hmgb3O54879 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hmgb3O54879 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm22671-201ENSMUST00000104420 134 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm11833-201ENSMUST00000118393 853 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm4835-201ENSMUST00000155839 972 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm28117-201ENSMUST00000188472 371 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm36928-201ENSMUST00000192466 694 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm37325-201ENSMUST00000194971 694 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm6077-201ENSMUST00000196008 499 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm45478-201ENSMUST00000209472 211 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm7151-201ENSMUST00000211511 954 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm18378-201ENSMUST00000216245 628 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 AC132590.1-201ENSMUST00000224374 1164 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 AC125405.2-201ENSMUST00000227862 383 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm6304-201ENSMUST00000096579 447 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm5361-201ENSMUST00000211041 1498 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hmgb3O54879 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Hmgb3O54879 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.55□□□□□ -1.52
Hmgb3O54879 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hmgb3O54879 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.54□□□□□ -1.52
Hmgb3O54879 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hmgb3O54879 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms