Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm10410-201ENSMUST00000180138 384 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm26898-201ENSMUST00000181678 384 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm28416-201ENSMUST00000188334 292 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm28996-201ENSMUST00000190316 721 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm43555-201ENSMUST00000196588 310 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm24826-202ENSMUST00000197298 216 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm9357-201ENSMUST00000207138 805 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Mir3068-201ENSMUST00000083004 136 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm14116-201ENSMUST00000117733 805 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm15047-201ENSMUST00000118891 454 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm15081-201ENSMUST00000119794 844 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm14787-201ENSMUST00000121236 388 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm11472-201ENSMUST00000121305 556 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm13282-201ENSMUST00000121577 545 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Mir5617-201ENSMUST00000176786 57 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm26528-201ENSMUST00000181965 283 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm43116-201ENSMUST00000199789 195 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm2975-201ENSMUST00000209710 820 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm18040-201ENSMUST00000217922 827 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm22865-201ENSMUST00000083949 214 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.17□□□□□ -1.42
Scrt1Q99M85 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
Scrt1Q99M85 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms