Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Mir6357-201ENSMUST00000184246 104 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm18501-201ENSMUST00000185363 664 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm37444-201ENSMUST00000193605 439 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm35638-201ENSMUST00000220724 652 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Snora21-201ENSMUST00000082967 137 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Mir455-201ENSMUST00000093594 82 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.53□□□□□ -1.36
Chmp1b1Q99LU0 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm9439-201ENSMUST00000119554 973 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm24422-201ENSMUST00000157800 119 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm7244-201ENSMUST00000164658 455 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm19840-201ENSMUST00000169624 882 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm27026-201ENSMUST00000183003 892 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Mir8094-201ENSMUST00000183361 117 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm27972-201ENSMUST00000184720 137 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm37669-201ENSMUST00000192184 820 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm37328-201ENSMUST00000193191 640 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm37017-201ENSMUST00000195266 747 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm43725-201ENSMUST00000200122 369 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm18226-201ENSMUST00000215261 521 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm22865-201ENSMUST00000083949 214 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Chmp1b1Q99LU0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp1b1Q99LU0 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms